BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C07SP1|AL426183
(770 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1440 1482 0.0
>3x_Contig1440
Length = 8228
Score = 1482 bits (747), Expect = 0.0
Identities = 763/766 (99%), Gaps = 2/766 (0%)
Strand = Plus / Minus
Query: 1 taaagttaatttataaagaaccatgggtgcaggtatacccactactgtctccagacgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1808 taaagttaatttataaagaaccatgggtgcaggtatacccactactgtctccagacgaaa 1749
Query: 61 tctttggcgactttatccttgatcactgatctcaactctgtgtataaccg-tatacactc 119
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1748 tctttggcgactntatccttgatcactgatctcaactctgtgtataaccggtatacactc 1689
Query: 120 tttctcacctgtttctaacactttaaacaactgtgactcgtcaaagctgcctaaactatc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1688 tttctcacctgtttctaacactttaaacaactgtgactcgtcaaagctgcctaaactatc 1629
Query: 180 aagaagaagcaggttcctgacatctatatccccgttctcattcgtgcccagctctagaca 239
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1628 aagaagaagcag-ttcctgacatctatatccccgttctcattcgtgcccagctctagaca 1570
Query: 240 gtatacgtggaccgattcacatttagctagctgcgattctgttgggttcaccaccagctg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1569 gtatacgtggaccgattcacatttagctagctgcgattctgttgggttcaccaccagctg 1510
Query: 300 cttcccttcagtggtaataccaatacaagtaccagaacacatactgagtaacggtacacc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1509 cttcccttcagtggtaataccaatacaagtaccagaacacatactgagtaacggtacacc 1450
Query: 360 agcatccaccaatgcgagcaccgctgcgttaacacatacactgacttctttcacagtata 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1449 agcatccaccaatgcgagcaccgctgcgttaacacatacactgacttctttcacagtata 1390
Query: 420 atccctgctttctcccgcttctaatacttggagacatatctgcacaaattgacgtggatg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1389 atccctgctttctcccgcttctaatacttggagacatatctgcacaaattgacgtggatg 1330
Query: 480 caagtatctcgcaagcactggggtcaacacagaacggatctgatcttccattaacttttc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1329 caagtatctcgcaagcactggggtcaacacagaacggatctgatcttccattaacttttc 1270
Query: 540 cctcgtactctgtacgccttcagcaggcttcacgatgatctctaatgcaagttgtgtggg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1269 cctcgtactctgtacgccttcagcaggcttcacgatgatctctaatgcaagttgtgtggg 1210
Query: 600 caactcttgcctagacttaggttccatgggtcccgaaacagaacagataactttagttcc 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1209 caactcttgcctagacttaggttccatgggtcccgaaacagaacagataactttagttcc 1150
Query: 660 gctgtttgaaacaacagaagagccatcaacatggcccaaaacatgcgtcgtagtctccat 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1149 gctgtttgaaacaacagaagagccatcaacatggcccaaaacatgcgtcgtagtctccat 1090
Query: 720 cttggctagaaaattactataggtacaatataacaatcaatacgca 765
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 cttggctagaaaattactataggtacaatataacaatcaatacgca 1044
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4254
Number of Sequences: 1807
Number of extensions: 4254
Number of successful extensions: 21
Number of sequences better than 1.0e-20: 1
length of query: 770
length of database: 10,358,551
effective HSP length: 16
effective length of query: 754
effective length of database: 10,329,639
effective search space: 7788547806
effective search space used: 7788547806
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)